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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932250.1_cds_XP_016478821.1_70428
CDS Infomation

[gene=LOC107800182] [db_xref=GeneID:107800182] [protein=putative 3,4-dihydroxy-2-butanone kinase] [protein_id=XP_016478821.1] [location=join(60993..61032,61917..61990,62102..62165,62887..62999,63088..63135,63366..63437,63559..63627,64794..64967,65355..65438,66122..66177,67850..67980,68050..68142,68454..68518,68889..69032,69119..69162,69918..70001,70098..70171,70256..70368,70454..70549,71501..71626)] [gbkey=CDS]
Sequence

ATGGCTTTCCAGAGCAAGAAACTCATCAACGACCCCAATGATGTTGTGACAGAGTTCATT
GAGGGACTTATTGAGACCTATCCCGGGTTGCAATATCTGGATGGTTTTCCTGAGGTTAAG
GTTGTCTTGCGTGCTGATGTTTTTGGGGAAAAATATGACAAAGTTGCGGTCATATCAGGT
GGTGGAAGTGGCCATGAACCTGCCCATGCTGGATTTGTTGGAGAAGGGATGCTGACTGCA
GCTATCTGTGGGGACGTTTTTACCTCTCCAAATGTTGACTCAATCGTTGCTGGCATACGA
GCTGTCACAGGTCCCATGGGGTGCCTTCTGATTGTCAAGAACTATACTGGTGATCGATTG
AATTTTGGTTTGGCTGCTGAACAAGCTAAATCTGAAGGTTACAAAGTAGAGATGGGGTTC
ACACTGATTTCACATGTGTATNGTCGAAGAGGTTTGGCAGGGACGATTCTTGTTCACAAG
GTTGCTGGAGCTGCAGCAGCTTGTGGTCTTCCTCTTGCTGACGTTGCAGCTGAAGCAAAA
CGTGCATCAGAAATGGTTGGGACAATGGGTGTTGCATTATCTGTTTGCACATTGCCAGGA
CAGGTGACGTCAGACCGTTTAGGCCCAGGAAAGATGGAGCTTGGTCTTGGAATACACGGG
GAACCAGGAGCTGCTGTAGCTGACCTACAACCAGTAGATGTGGTGGTTTCACATGTTTTG
AAGGAGATTTTGTCATCGGAGACCAACTACGTTCCAATTACACGTGGGAGTAGAGTTGTG
CTCCTCATTAATGGATTAGGAGCAACACCATTGATGGAATTGATGATTATAGCTGGCAAG
GCTGTCCCAGGATTGCAGCTTGAACATGGTCTAGCTGTTGATAGAGTCTATACAGGATCA
CTTATGACTTCACTTGATATGGCAGGATTTTCAATTTCTGTAATGAAAGCTGATCAAGCA
ATTTTAGACCGTTTAGATGCTCCCACTAAAGCTCCAAATTGGCCTGTTGGTGCTGATGGT
AACCGACCTCCTGCAAAGATACCTGTTCCGCTTCCTCCACCACATTCGATCCAGAGTGAC
AAGACATTGAGTCGGCCTGAAAAACTGAGCTCTCTGGGTCATATTCTTGAGGCAGCTATT
GAAGCTGCAGCAACTGAAGTTGTAAATCTCAGGGATAATTTGAATGAGTGGGATAGCAAA
GTTGGTGATGGTGATTGTGGTTCAACTATGTTCAGAGGTGCAGTGACTATACTTGAAGAC
ATGAAGAAGTACTATCCGTTGAATGACCCTGCAGAAACAGTCAATGAAATTGGATCTTCT
ATTAGAAGAGTAATGGGGGGAACAAGCGGTATCTTATATGATATATTCTGTAAGGCAGCA
TATGCAAAGTTGAAAGCAGATTCCGAGTTGGTTGTCACAGCTCTGCACTGGGCTGATGCA
CTTGAAGCTGCTATCGCTGCTGTTAGTAAATATGGAGGAGCTCGTGCTGGTTATCGCACA
CTTTTAGATGCTCTTATTCCAGCATTGTCAGCTCTTAAAGAGAGGTTGAGTGCTGGGGAC
AACCCTGTGGATGCTTTCGTTATTTCTGCTGAGGCAGCAGTCGCTGGAGCCGAGTCAACC
AAGAACATGCAAGCGCAGGCTGGCCGTTCAACCTACATACCTGGAGATGTTCTTGCTTCA
ATTCCTGACCCTGGTGCCATGGCTGCAGCTGCGTGGTACAGAGCTGCTGCTTTAGCTATA
AAGGAGAAGTATAATACAGCATAA

Peptide Sequence

PEP ID

XP_016478821.1
PEP Infomation

PREDICTED: putative 3,4-dihydroxy-2-butanone kinase [Nicotiana tabacum]
Sequence

MAFQSKKLINDPNDVVTEFIEGLIETYPGLQYLDGFPEVKVVLRADVFGEKYDKVAVISG
GGSGHEPAHAGFVGEGMLTAAICGDVFTSPNVDSIVAGIRAVTGPMGCLLIVKNYTGDRL
NFGLAAEQAKSEGYKVEMGFTLISHVYXRRGLAGTILVHKVAGAAAACGLPLADVAAEAK
RASEMVGTMGVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVL
KEILSSETNYVPITRGSRVVLLINGLGATPLMELMIIAGKAVPGLQLEHGLAVDRVYTGS
LMTSLDMAGFSISVMKADQAILDRLDAPTKAPNWPVGADGNRPPAKIPVPLPPPHSIQSD
KTLSRPEKLSSLGHILEAAIEAAATEVVNLRDNLNEWDSKVGDGDCGSTMFRGAVTILED
MKKYYPLNDPAETVNEIGSSIRRVMGGTSGILYDIFCKAAYAKLKADSELVVTALHWADA
LEAAIAAVSKYGGARAGYRTLLDALIPALSALKERLSAGDNPVDAFVISAEAAVAGAEST
KNMQAQAGRSTYIPGDVLASIPDPGAMAAAAWYRAAALAIKEKYNTA

Transcript Sequence

Gene sequence data has not been registered.